2022-04-04 09:26:52,920 - INFO - Running RABIES - version: 0.3.5 2022-04-04 09:26:52,920 - INFO - CLI INPUTS: -> rabies_step = analysis -> plugin = Linear -> local_threads = 80 -> scale_min_memory = 1.0 -> min_proc = 1 -> confound_correction_out = /confound_out -> output_dir = /analysis_out -> output_name = analysis_wf -> scan_list = ['all'] -> seed_list = ['/roi_folder/ACA_l.nii.gz', '/roi_folder/CPu_l.nii.gz', '/roi_folder/MOp_l.nii.gz', '/roi_folder/S1bf_l.nii.gz'] -> seed_prior_list = [] -> prior_maps = /home/rabies/.local/share/rabies/melodic_IC.nii.gz -> prior_bold_idx = [5, 12, 19] -> prior_confound_idx = [0, 1, 2, 6, 7, 8, 9, 10, 11, 13, 14, 21, 22, 24, 26, 28, 29] -> data_diagnosis = False -> FC_matrix = True -> ROI_type = parcellated -> group_ICA = False -> dim = 0 -> melodic_random_seed = 1 -> DR_ICA = False -> dual_ICA = 0 2022-04-04 09:26:53,583 - WARNING - Matplotlib created a temporary config/cache directory at /tmp/matplotlib-j9dy3617 because the default path (/home/m/mchakrav/gjoanes/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. 2022-04-04 09:26:53,647 - INFO - Generating new fontManager, this may take some time... 2022-04-04 09:28:35,652 - INFO - Running workflow with Linear plugin. 2022-04-04 09:28:35,672 - INFO - Workflow confound_correction_wf_main_post_wf settings: ['check', 'execution', 'logging', 'monitoring'] 2022-04-04 09:28:35,702 - INFO - Running serially. 2022-04-04 09:28:35,703 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.confound_correction_wf_outputnode" in "/analysis_out/confound_correction_wf_main_post_wf/_split_name_sub-300102_task-rest_bold/confound_correction_wf_outputnode". 2022-04-04 09:28:35,706 - INFO - [Node] Running "confound_correction_wf_outputnode" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:28:35,725 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.confound_correction_wf_outputnode". 2022-04-04 09:28:35,726 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.confound_correction_wf.prep_CR" in "/analysis_out/confound_correction_wf_main_post_wf/confound_correction_wf/_split_name_sub-300102_task-rest_bold/prep_CR". 2022-04-04 09:28:35,732 - INFO - [Node] Running "prep_CR" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:28:53,069 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.confound_correction_wf.prep_CR". 2022-04-04 09:28:53,070 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.confound_correction_wf.regress" in "/analysis_out/confound_correction_wf_main_post_wf/confound_correction_wf/_split_name_sub-300102_task-rest_bold/regress". 2022-04-04 09:28:53,095 - INFO - [Node] Running "regress" ("rabies.conf_reg_pkg.confound_correction.Regress") 2022-04-04 09:32:03,797 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.confound_correction_wf.regress". 2022-04-04 09:32:03,798 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_prep_dict" in "/analysis_out/confound_correction_wf_main_post_wf/_split_name_sub-300102_task-rest_bold/analysis_wf_prep_dict". 2022-04-04 09:32:04,023 - INFO - [Node] Running "analysis_wf_prep_dict" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:32:04,102 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_prep_dict". 2022-04-04 09:32:04,102 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_joinnode_main" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf_joinnode_main". 2022-04-04 09:32:04,219 - INFO - [Node] Running "analysis_wf_joinnode_main" ("nipype.interfaces.utility.base.IdentityInterface") 2022-04-04 09:32:04,297 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_joinnode_main". 2022-04-04 09:32:04,298 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_find_iterable" in "/analysis_out/confound_correction_wf_main_post_wf/_scan_split_name_sub-300102_task-rest_bold/analysis_wf_find_iterable". 2022-04-04 09:32:04,417 - INFO - [Node] Running "analysis_wf_find_iterable" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:32:04,496 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_find_iterable". 2022-04-04 09:32:04,496 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_read_dict" in "/analysis_out/confound_correction_wf_main_post_wf/_scan_split_name_sub-300102_task-rest_bold/analysis_wf_read_dict". 2022-04-04 09:32:04,612 - INFO - [Node] Running "analysis_wf_read_dict" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:32:04,669 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_read_dict". 2022-04-04 09:32:04,669 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_split_joinnode" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf_split_joinnode". 2022-04-04 09:32:04,673 - INFO - [Node] Running "analysis_wf_split_joinnode" ("nipype.interfaces.utility.base.IdentityInterface") 2022-04-04 09:32:04,675 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_split_joinnode". 2022-04-04 09:32:04,676 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_S1bf_l/seed_based_FC". 2022-04-04 09:32:04,680 - INFO - [Node] Running "seed_based_FC" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:32:20,122 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC". 2022-04-04 09:32:20,122 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_MOp_l/seed_based_FC". 2022-04-04 09:32:20,129 - INFO - [Node] Running "seed_based_FC" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:32:35,770 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC". 2022-04-04 09:32:35,771 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_CPu_l/seed_based_FC". 2022-04-04 09:32:35,775 - INFO - [Node] Running "seed_based_FC" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:32:51,533 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC". 2022-04-04 09:32:51,534 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_ACA_l/seed_based_FC". 2022-04-04 09:32:51,540 - INFO - [Node] Running "seed_based_FC" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:33:07,338 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf.seed_based_FC". 2022-04-04 09:33:07,339 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf.seed_FC_joinnode" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf/_scan_split_name_sub-300102_task-rest_bold/seed_FC_joinnode". 2022-04-04 09:33:07,344 - INFO - [Node] Running "seed_FC_joinnode" ("nipype.interfaces.utility.base.IdentityInterface") 2022-04-04 09:33:07,347 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf.seed_FC_joinnode". 2022-04-04 09:33:07,347 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf.FC_matrix" in "/analysis_out/confound_correction_wf_main_post_wf/analysis_wf/_scan_split_name_sub-300102_task-rest_bold/FC_matrix". 2022-04-04 09:33:07,351 - INFO - [Node] Running "FC_matrix" ("nipype.interfaces.utility.wrappers.Function") 2022-04-04 09:33:22,504 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf.FC_matrix". 2022-04-04 09:33:22,505 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_datasink" in "/analysis_out/confound_correction_wf_main_post_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_S1bf_l/analysis_wf_datasink". 2022-04-04 09:33:22,511 - INFO - [Node] Running "analysis_wf_datasink" ("nipype.interfaces.io.DataSink") 2022-04-04 09:33:22,540 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_datasink". 2022-04-04 09:33:22,540 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_datasink" in "/analysis_out/confound_correction_wf_main_post_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_MOp_l/analysis_wf_datasink". 2022-04-04 09:33:22,544 - INFO - [Node] Running "analysis_wf_datasink" ("nipype.interfaces.io.DataSink") 2022-04-04 09:33:22,547 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_datasink". 2022-04-04 09:33:22,547 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_datasink" in "/analysis_out/confound_correction_wf_main_post_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_CPu_l/analysis_wf_datasink". 2022-04-04 09:33:22,551 - INFO - [Node] Running "analysis_wf_datasink" ("nipype.interfaces.io.DataSink") 2022-04-04 09:33:22,554 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_datasink". 2022-04-04 09:33:22,554 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.analysis_wf_datasink" in "/analysis_out/confound_correction_wf_main_post_wf/_scan_split_name_sub-300102_task-rest_bold/_seed_name_ACA_l/analysis_wf_datasink". 2022-04-04 09:33:22,558 - INFO - [Node] Running "analysis_wf_datasink" ("nipype.interfaces.io.DataSink") 2022-04-04 09:33:22,562 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.analysis_wf_datasink". 2022-04-04 09:33:22,562 - INFO - [Node] Setting-up "confound_correction_wf_main_post_wf.confound_correction_wf_datasink" in "/analysis_out/confound_correction_wf_main_post_wf/_split_name_sub-300102_task-rest_bold/confound_correction_wf_datasink". 2022-04-04 09:33:22,567 - INFO - [Node] Running "confound_correction_wf_datasink" ("nipype.interfaces.io.DataSink") 2022-04-04 09:33:33,200 - INFO - [Node] Finished "confound_correction_wf_main_post_wf.confound_correction_wf_datasink".